Thermal Tolerance Phenotype in cdc13-1 exo1 Heterozygous Diploids of S. Cerevisiae is a Dominant Trait
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Background: Telomeric DNA is found at the end of eukaryotic chromosomes, where they play a role in protecting the chromosome and the integrity of the genome of the organism through the activity of telomerase. Saccharomyces cerevisiae exists in two genotypes: haploid and diploid. Temperature sensitive point mutation on the cdc13 gene of each genotype and deletion of exo1 gene (cdc13-1Exo1 mutants) give rise to mutant survivors at enhanced temperatures. The mode of inheritance of the thermal tolerance allele in the heterozygous diploid genotype is not known.
Materials and Methods: We constructed diploids by mating temperature sensitive haploid strains of opposite mating type cdc13-1 exo1: LEU with temperature resistant strains of cdc13-1 exo1::HIS. The crosses were 1296x3182 (D) and 2561x3181 (C). Using a sterile stick, smear of one haploid strain was made on each YEPD plates labelled C2, C8, C10, D4, D10, and D113. A smear of another opposite mating type was made on the previous strain. They were mixed and allowed to mate for six hours, before culturing on media lacking Luecine and Histidine (–L and –H) to purify and confirm that they are diploids. After confirmation, a loop full aliquot of the diploids were streaked on sterile media lacking leucine and histidine (-L, -H) and on YEPD and cultured at 370C to check thermal tolerance and number of viable colonies from each diploid crosses in (cfu).
Result: The heterozygous diploid D thrived at the enhanced temperature of 370C and there is a significant difference in the yield of viable colonies by the D diploids when compared to the yield of the C diploids with P-value of 0.05.
Conclusion: The growth of diploid D10 as shown in plate 3.1 establishes that, temperature resistant allele inherited by cdc13-1 exo1heterozygous diploids is a dominant phenotype, and its mode of inheritance is dominant as the heterozygous diploid thrived at the enhanced temperature of 370C.
Okafor, S. A., Okey-Mbata, C. C., Daniel, J. A. Arukalam, F. M., Daniel-Nwosu E. I. and Okafor, A. L. (2021) Miscellany of HospitalContact Surfaces Microbiome: A Case Study of Selected Hospitals in Owerri South Eastern Nigeria, Afr.. J Med. Phy., Eng. & Sc., (8)2, 48 – 57.
Okafor, S. A., Ekuma, I. C., Okey-Mbata, C. C., Ezeamaku, U. L., Okafor, A. L., Arukalam, F. M., and Eziefuna, E. O. (2022a),Investigating The Bioburden Of “Neglected” Hospital Low Contact Surfaces Advances in Microbiology., (12)5, 01 – 09.
LeBel, C., Rosonina, E., Sealey, D., C., Pryde, F., Lydall, D., Maringele, L., and Harrington, L., A. (2009) Telomere Maintenance and Survival in Saccharomyces cerevisiae in the Absence of Telomerase and RAD52.Genetics 176, 1659-65.
Makovets, S., Williams, T. L. and Blackburn, E. H (2008) The telotype defines the telomere state in Saccharomyces cerevisiae and is inherited as a dominant non-Mendelian characteristic in cells lacking telomerase. Genetics 178(1), 245-57.
Betlem,K., Hoksbergen, S., Mansouri, N., ...Banks, C., Peeters, M. (2018). Real-time analysis of microbial growth by means of the Heat-Transfer Method (HTM) using Saccharomyces cerevisiae as model organism. Physics in Medicine, 6, 1–8.
Strucko, T., Lisby, M., Mortensen, U.H. (2021) DNA Double-Strand Break-Induced Gene Amplification in Yeast. Methods in Molecular Biology, 2153, 239–252.
Dewhurst, S.M., Yao, X., Rosiene, J., ...de Lange, T., Imieliński, M. (2021) Structural variant evolution after telomere crisis, Nature Communications, 12(1), 2093.
Morafraile, E.C., Hänni, C., Allen, G., ...Lydall, D., Zegerman, P. (2019). Checkpoint inhibition of origin firing prevents DNA topological stress. Genes & development, 33(21-22), 1539–1554.
Garcia, L. E., Zubko, M. K., Zubko, E. I., Sanchez-Puerta, M. V. (2019). Elucidating genomic patterns and recombination events in plant cybrid mitochondria. Plant Molecular Biology, 100(4-5), 433–450.
Charifi, F., Churikov, D., Eckert-Boulet, N., ...Simon, M.-N., Géli, V. (2021) Rad52 SUMOylation functions as a molecular switch that determines a balance between the Rad51- and Rad59-dependent survivors. iScience, 24(3), 102231.
Hao, L., Y., Armanios, M., Strong, M., A., Karim, B., Feldser, D., M., Huso, D. Greider, C., W. (2005) Short telomeres, even in the presence of telomerase, limit tissue renewal capacity. Cell 123(6), 1121–31.
Zubko, M.K. and Lydall, D. (2006) Linear chromosome maintenance in the absence of essential telomere-capping proteins. Nat Cell Biol. 8(7), 734-40.
Lundblad, V., and Blackburn, E., H (1993) An alternative pathway for yeast telomere maintenance rescues est1-senescence.Cell 73, 347-60.
Lie, S., Banks, P., Lawless, C., Lydall, D., Petersen, J.(2018). The contribution of non-essential schizosaccharomyces pombe genes to fitness in response to altered nutrient supply and target of rapamycin activity. Open Biology 8(5), 180015.
Teixeira-Silva A., Ait Saada A., Hardy J., Iraqui I., Nocente M.C., Fréon K and Lambert S. (2017). The end-joining factor Ku acts in the end-resection of double strand break-free arrested replication forks. Nat. Commun; 8 (29215009) 10.1038/s41467-017-02144-5.
Ayra-Plasencia, J., Ramos-Pérez, C., Santana-Sosa, S., ...Lisby, M., Machín, F. (2021). Topoisomerase II
deficiency leads to a postreplicative structural shift in all Saccharomyces cerevisiae chromosomes. Scientific Reports, 11(1), 14940.
Craig, E. A. and Kurt, J (1984) Mutations Of the Heat Inducible 70 Kilodaiton Genes of yeast Confer temperature sensitive growth. Cell 38(30) 841- 49.
Shi Y., Hellinga H. and Beese L. (2017) Interplay of catalysis, fidelity, threading, and processivity in the exo- and endonucleolytic reactions of human exonuclease I. Proc. Natl. Acad. Sci. 114 (28533382): 6010-6015, 10.1073/pnas.1704845114.
Blackburn, E. H (2000) Telomere States And Cell Fates. Nature (408) 53–56.
Markiewicz-Potoczny, M., Lobanova, A., Loeb, A.M., ...Ruiz, S., Lazzerini Denchi, E. (2021). TRF2-mediated telomere protection is dispensable in pluripotent stem cells. Nature, 589(7840), 110–115.
Torrance, V., Lydall, D. (2018). Overlapping open reading frames strongly reduce human and yeast STN1 gene expression and affect telomere function. PLoS Genetics, 14(8), e1007523.
Rodrigues, J., Banks, P., Lydall, D. (2018). Vps74 connects the golgi apparatus and telomeres in saccharomyces cerevisiae. G3: Genes, Genomes, Genetics, 8(5), 1807–1816.
Ambjørn, S.M., Duxin, J.P., Hertz, E.P.T., ...Lisby, M., Nilsson, J. (2021). A complex of BRCA2
and PP2A-B56 is required for DNA repair by homologous recombination. Nature Communications, 12(1), 5748.
Bowen N. Kolodner R. (2017) Reconstitution of Saccharomyces cerevisiae DNA polymerase epsilon-dependent mismatch repair with purified proteins. Proc. Natl.Acad.Sci. 114 (28265089): 3607-3612,10.1073/pnas.1701753114.
Roy, U., Kwon, Y., Marie, L., ...Lisby, M., Greene, E.C. (2021) The Rad51 paralog complex Rad55-Rad57 acts as a molecular chaperone during homologous recombination. Molecular Cell, 81(5), 1043–1057.e8.
Okafor, S.A., Agbasi, P.U., Azeez, O.T., Iwuji, S.C., Ezeamaku, L.U., Arukalam, F.N. and Eziefuna, E.O. (2022b) The Frequency of Survivorship in Heterozygous Diploids of Cdc13-1exo1Δ Mutants of S. cerevisiae Is One Survivor Cell in 72 Cells/Generation at 36˚C. Advances in Bioscience and Biotechnology, 13, 469-478.
Olbrich, T., Vega-Sendino, M., Tillo, D., ...Nussenzweig, A., Ruiz, S. (2021). CTCF is a barrier for 2C-like reprogramming. Nature Communications,12(1), 4856.
Charrier-Savournin, F. B.; Château, M.; Gire, V.; Sedivy, J.; Piette, J.; Dulić, V. (2004). "p21-Mediated Nuclear Retention of Cyclin B1-Cdk1 in Response to Genotoxic Stress" Molecular Biology of the Cell15 (9): 3965–76.
Rodrigues, J., Lydall, D. (2018a). Paf1 and Ctr9, core components of the PAF1 complex, maintain low levels of telomeric repeat containing RNA. Nucleic Acids Research, 46(2),621–634.